CELL MODEL DATASHEET

Human iPSC-Derived Kupffer Cells

Human iPSC-Derived Kupffer Cells

Resident hepatic macrophages for inflammation, fibrosis and immune-mediated hepatotoxicity

Cytochroma human iPSC-derived Kupffer cells are the resident macrophages of the liver, differentiated from ancestrally diverse, HLA-typed induced pluripotent stem cell lines. They ship at a minimum of 1 million viable cells per vial, show authentic macrophage morphology with phagocytosis quantified in a real-time live-cell imaging assay, and carry functional pattern-recognition receptors with inducible cytokine responses relevant to liver immunity. They are built to be co-cultured with Cytochroma iPSC-derived hepatocytes and hepatic stellate cells, so that inflammation, fibrosis and immune-mediated hepatotoxicity can be modelled in a single genetically defined human liver system.

8 / 18

donor lines fully HLA-typed

71

distinct HLA alleles across the panel

1:1

female to male donor balance

3

Mapped to 3 diverse ancestry groups

Why this model

IAuthentic hepatic macrophage phenotype

Macrophage morphology with elongated cells and filopodia, active phagocytosis, and a qPCR identity panel covering the Kupffer-specific markers CD5L, VSIG4, MARCO, CXCL12 and ITLN1, plus CD68 by immunofluorescence.

Functional innate immunity

Functional pattern-recognition receptors and inducible cytokine responses, allowing genuine innate-immune activation studies rather than morphology alone.

Built for co-culture

Diverse-donor hepatic immune cells designed to integrate into MAFLD, MASH, fibrosis, DILI and 3D microtissue models alongside matched or deliberately HLA-mismatched hepatocytes.

specifications


Cell type

Human iPSC-derived endothelial cells

Donor panel

8 of 18 lines fully HLA-typed at two-field resolution; 71 distinct HLA alleles; 1:1 female to male

Viable cells per vial

1 x 10⁶ cells per vial

Post-thaw viability

70% by automated trypan blue exclusion

Format

Cryopreserved, 1.0 mL per vial; store at or below -145 °C; 12 months from receipt

Identity markers

Macrophage lineage confirmed by flow cytometry: CD45-positive, CD14-positive, CD11b-positive, with clear CD206 and CD86 expression. CD68 detected by immunofluorescence. qPCR identity panel: CD5L, VSIG4, MARCO, CXCL12, ITLN1.

Functional characterisation

Phagocytosis quantified in a real-time live-cell imaging assay using pHrodo red E. coli microparticles. All lines internalised particles rapidly, with peak intracellular fluorescence between 10 and 18 hours and signal still detectable at 60 hours, consistent with lysosomal processing.

Identity, morphology

Elongated with filopodia, assessed by microscopy

Identity, gene expression

qPCR panel: CD5L, VSIG4, MARCO, CXCL12, ITLN1

Identity, protein marker

CD68 detected by immunofluorescence

Survivability

Adherence at 24 hours confirmed by microscopy

Documentation

Certificate of Analysis with every batch: full pass/fail specification, CD68 fluorescent microscopy, qPCR identity panel, lot, viability and expiry

Sterility and mycoplasma

Mycoplasma negative by MycoAlert activity assay (ratio less than 1.0); bacteria and fungi negative by visual assessment at QC4

Supply model

Offered as an in-house or collaborative model, not a catalogue product

Manufactured in

Roslin Innovation Centre, Edinburgh, United Kingdom


Phenotype and imaging

Representative immunofluorescence from Cytochroma production batches. Full imaging data and batch-specific Certificates of Analysis are available on request.


Immunofluorescence micrograph of Cytochroma human iPSC-derived hepatocytes stained for albumin in green with nuclei counterstained blue, showing cobblestone morphology and frequent binucleation. Albumin immunostaining (green) with nuclear counterstain (blue). Cobblestone morphology and binucleate cells are hallmarks of mature hepatocyte identity, not the flat, fetal-like phenotype typical of immature iPSC-hepatocyte protocols.

CD68 immunofluorescence (green) in Cytochroma iPSC-derived Kupffer cells. CD68 detection is a release criterion on every batch, run alongside a qPCR identity panel of CD5L, VSIG4, MARCO, CXCL12 and ITLN1.

Applications

  • Immune-mediated drug-induced liver injury (DILI)

  • MASH and MAFLD inflammation and disease progression models

  • Liver fibrosis models in co-culture with hepatic stellate cells

  • Innate immune activation, phagocytosis and cytokine release assays

  • 3D liver microtissue and multicellular co-culture systems

  • Donor-mismatched and allogeneic immune-response studies using HLA-typed lines

Donor diversity and HLA typing

Every Cytochroma cell model is differentiated from an induced pluripotent stem cell library built deliberately for population-level variability rather than convenience. 8 of 18 of 18 iPSC donor lines fully HLA-typed at two-field resolution. 71 distinct HLA alleles across the panel. 1:1 female to male donor balance. European, Native American and African ancestry represented. Pairwise HLA mismatch scores of 7 to 10 out of 10 between almost every donor pair, across HLA-A, B, C, DRB1 and DQB1.

Typing covers the classical class I loci HLA-A, HLA-B and HLA-C and the class II loci DRB1, DRB3/4/5, DQA1, DQB1, DPA1 and DPB1 at two-field resolution. Full multi-field typing is available on request. Because almost every donor pair scores 7 to 10 out of 10 on pairwise allele-level mismatch, donor-mismatched co-culture, allogeneic response and HLA-restriction studies can be set up off the shelf.

Evidence and validation

Released against a defined specification

Every batch is released against a written specification covering purity, viable recovery, mycoplasma, sterility, morphology, adherence, a five-gene qPCR identity panel and CD68 immunofluorescence, and ships with a Certificate of Analysis.

Diversity built in

Kupffer cells are differentiated from the same ancestrally diverse, HLA-typed iPSC library as Cytochroma hepatocytes, so immune and parenchymal compartments can be genotype-matched or deliberately mismatched.

OASIS Consortium

Cytochroma is an Advanced Liver Partner in the OASIS Consortium (’Omics for Assessing Signatures for Integrated Safety), a pre-competitive hepatic-safety consortium convened in July 2023 by HESI Global and the Broad Institute of Harvard and MIT as a working group of HESI’s eSTAR committee. OASIS integrates transcriptomics, proteomics and high-content Cell Painting across human-relevant models, with an initial focus on liver safety, and spans more than 160 experts across 17 academic institutes, 7 government agencies, 17 industry organisations and 3 NGOs. Cytochroma contributes diverse-donor human liver models to the consortium’s hepatic-safety programme. See The OASIS Consortium: Integrating Multi-Omics Technologies to Transform Chemical Safety Assessment, Rouquié et al., Toxicological Sciences 2025, 208(2), 225 (DOI 10.1093/toxsci/kfaf128).

Applications

  • Immune-mediated drug-induced liver injury (DILI)

  • MASH and MAFLD inflammation and disease progression models

  • Liver fibrosis models in co-culture with hepatic stellate cells

  • Innate immune activation, phagocytosis and cytokine release assays

  • 3D liver microtissue and multicellular co-culture systems

  • Donor-mismatched and allogeneic immune-response studies using HLA-typed lines

Donor diversity and HLA typing

Every Cytochroma cell model is differentiated from an induced pluripotent stem cell library built deliberately for population-level variability rather than convenience. 8 of 18 of 18 iPSC donor lines fully HLA-typed at two-field resolution. 71 distinct HLA alleles across the panel. 1:1 female to male donor balance. European, Native American and African ancestry represented. Pairwise HLA mismatch scores of 7 to 10 out of 10 between almost every donor pair, across HLA-A, B, C, DRB1 and DQB1.

Typing covers the classical class I loci HLA-A, HLA-B and HLA-C and the class II loci DRB1, DRB3/4/5, DQA1, DQB1, DPA1 and DPB1 at two-field resolution. Full multi-field typing is available on request. Because almost every donor pair scores 7 to 10 out of 10 on pairwise allele-level mismatch, donor-mismatched co-culture, allogeneic response and HLA-restriction studies can be set up off the shelf.

Evidence and validation

Released against a defined specification

Every batch is released against a written specification covering purity, viable recovery, mycoplasma, sterility, morphology, adherence, a five-gene qPCR identity panel and CD68 immunofluorescence, and ships with a Certificate of Analysis.

Diversity built in

Kupffer cells are differentiated from the same ancestrally diverse, HLA-typed iPSC library as Cytochroma hepatocytes, so immune and parenchymal compartments can be genotype-matched or deliberately mismatched.

OASIS Consortium

Cytochroma is an Advanced Liver Partner in the OASIS Consortium (’Omics for Assessing Signatures for Integrated Safety), a pre-competitive hepatic-safety consortium convened in July 2023 by HESI Global and the Broad Institute of Harvard and MIT as a working group of HESI’s eSTAR committee. OASIS integrates transcriptomics, proteomics and high-content Cell Painting across human-relevant models, with an initial focus on liver safety, and spans more than 160 experts across 17 academic institutes, 7 government agencies, 17 industry organisations and 3 NGOs. Cytochroma contributes diverse-donor human liver models to the consortium’s hepatic-safety programme. See The OASIS Consortium: Integrating Multi-Omics Technologies to Transform Chemical Safety Assessment, Rouquié et al., Toxicological Sciences 2025, 208(2), 225 (DOI 10.1093/toxsci/kfaf128).

Frequently asked questions

What are Kupffer cells and why do liver models need them?
How are Cytochroma iPSC-derived Kupffer cells identified and released?
Can they be co-cultured with iPSC-derived hepatocytes?
Are the Kupffer cells HLA-typed?
How are they supplied?
Are the cells cryopreserved?

Request a quote or technical discussion

Tell us your assay format, donor requirements, and timelines. Our scientific team will help select the right donor panel and model configuration.

© 2026 Cytochroma Limited. All rights reserved


© 2026 Cytochroma Limited. All rights reserved


© 2026 Cytochroma Limited. All rights reserved